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1.
Hum Reprod ; 2024 May 13.
Artículo en Inglés | MEDLINE | ID: mdl-38741233

RESUMEN

STUDY QUESTION: What is the functional significance of Tex13b in male germ cell development and differentiation? SUMMARY ANSWER: Tex13b regulates male germ cell differentiation by metabolic reprogramming during spermatogenesis. WHAT IS KNOWN ALREADY: Studies in mice and humans suggest that TEX13B is a transcription factor and is exclusively expressed in germ cells. STUDY DESIGN, SIZE, DURATION: We sequenced the coding regions of TEX13B in 628 infertile men and 427 ethnically matched fertile control men. Further, to identify the molecular function of Tex13b, we created a Tex13b knockout and conditional overexpression system in GC-1spg (hereafter, GC-1) cells. PARTICIPANTS/MATERIALS, SETTING, METHODS: Our recent exome sequencing study identified novel candidate genes for male infertility. TEX13B was found to be one of the potential candidates, hence we explored the role of TEX13B in male infertility within a large infertile case-control cohort. We performed functional analyses of Tex13b in a GC-1 cell line using CRISPR-Cas9. We differentially labelled the cell proteins by stable isotope labelling of amino acids in cell culture (SILAC) and performed mass spectrometry-based whole-cell proteomics to identify the differential protein regulation in knockout cells compared to wild-type cells. We found that Tex13b knockout leads to downregulation of the OXPHOS complexes and upregulation of glycolysis genes, which was further validated by western blotting. These results were further confirmed by respirometry analysis in Tex13b knockout cells. Further, we also performed a conditional overexpression of TEX13B in GC-1 cells and studied the expression of OXPHOS complex proteins by western blotting. MAIN RESULTS AND THE ROLE OF CHANCE: We identified a rare variant, rs775429506 (p.Gly237Glu), exclusively in two non-obstructive-azoospermia (NOA) men, that may genetically predispose these men for infertility. Further, we demonstrated that Tex13b functions in the transcription regulation of OXPHOS complexes. LARGE SCALE DATA: N/A. LIMITATIONS, REASONS FOR CAUTION: We examined the function of Tex13b in GC-1 in vitro by knocking out and conditional overexpression, for understanding the function of Tex13b in germ cells. Unfortunately, this could not be replicated in either an animal model or in patient-derived tissue due to the non-availability of an animal model or patient's testis biopsies. WIDER IMPLICATIONS OF THE FINDINGS: This study identified that Tex13b plays an important role in male germ cell development and differentiation. The findings of this study would be useful for screening infertile males with spermatogenic failure and counselling them before the implementation of assisted reproduction technique(s). STUDY FUNDING/COMPETING INTEREST(S): Funding was provided by the Council of Scientific and Industrial Research (CSIR) under the network project (BSC0101 and MLP0113) and SERB, the Department of Science and Technology, Government of India (J C Bose Fellowship: JCB/2019/000027). The authors do not have any competing interest.

2.
Opt Express ; 32(6): 10033-10045, 2024 Mar 11.
Artículo en Inglés | MEDLINE | ID: mdl-38571224

RESUMEN

Fiber optic interferometry combined with recognizing elements has attracted intensive attention for the development of different biosensors due to its superior characteristic features. However, the immobilization of sensing elements alone is not capable of low-concentration detection due to weak interaction with the evanescent field of the sensing transducer. The utilization of different 2D materials with high absorption potential and specific surface area can enhance the intensity of the evanescent field and hence the sensitivity of the sensor. Here, a biosensor has been fabricated using an inline hetero fiber structure of photonic crystal fiber (PCF) and single-mode fiber (SMF) functionalized with a nanocomposite of molybodenum di-sulfide (MoS2) and molecular imprinting polymer (MIP) to detect trace levels of bovine serum albumin (BSA). The sensor showed a wide dynamic detection range with a high sensitivity of 2.34 × 107 pm/µg L-1. It shows working potential over a wide pH range with a subfemtomolar detection limit. The compact size, easy fabrication, stable structure, long detection range, and high sensitivity of this sensor would open a new path for the development of different biosensors for online and remote sensing applications.


Asunto(s)
Impresión Molecular , Nanocompuestos , Polímeros/química , Molibdeno , Tecnología de Fibra Óptica
3.
Biosens Bioelectron ; 254: 116232, 2024 Jun 15.
Artículo en Inglés | MEDLINE | ID: mdl-38520984

RESUMEN

Healthcare system is undergoing a significant transformation from a traditional hospital-centered to an individual-centered one, as a result of escalating chronic diseases, ageing populations, and ever-increasing healthcare costs,. Wearable sensors have become widely used in health monitoring systems since the COVID-19 pandemic. They enable continuous measurement of important health indicators like body temperature, wrist pulse, respiration rate, and non-invasive bio fluids like saliva and perspiration. Over the last few decades, the development has mostly concentrated on electrochemical and electrical wearable sensors. However, due to the drawbacks of such sensors, such as electronic waste, electromagnetic interference, non-electrical security, and poor performance, researchers are exhibiting a strong interest in optical principle-based systems. Fiber-based optical wearables are among the most promising healthcare systems because of advancements in high-sensitivity, durable, multiplexed sensing, and simple integration with flexible materials to improve wearability and simplicity. We present an overview of recent developments in optical fiber-based wearable sensors, focusing on two mechanisms: wavelength interrogation and intensity modulation for the detection of body temperature, pulse rate, respiration rate, body movements, and biomedical noninvasive fluids, with a thorough examination of their benefits and drawbacks. This review also focuses on improving working performance and application techniques for healthcare systems, including the integration of nanomaterials and the usage of the Internet of Things (IoT) with signal processing. Finally, the review concludes with a discussion of the future possibilities and problems for optical fiber-based wearables.


Asunto(s)
Técnicas Biosensibles , Dispositivos Electrónicos Vestibles , Humanos , Técnicas Biosensibles/métodos , Fibras Ópticas , Pandemias , Monitoreo Fisiológico/métodos
4.
ACS Omega ; 9(3): 3037-3069, 2024 Jan 23.
Artículo en Inglés | MEDLINE | ID: mdl-38284054

RESUMEN

Over the last 20 years, optical fiber-based devices have been exploited extensively in the field of biochemical sensing, with applications in many specific areas such as the food processing industry, environmental monitoring, health diagnosis, bioengineering, disease diagnosis, and the drug industry due to their compact, label-free, and highly sensitive detection. The selective and accurate detection of biochemicals is an essential part of biosensing devices, which is to be done through effective functionalization of highly specific recognition agents, such as enzymes, DNA, receptors, etc., over the transducing surface. Among many optical fiber-based sensing technologies, optical fiber interferometry-based biosensors are one of the broadly used methods with the advantages of biocompatibility, compact size, high sensitivity, high-resolution sensing, lower detection limits, operating wavelength tunability, etc. This Review provides a comprehensive review of the fundamentals as well as the current advances in developing optical fiber interferometry-based biochemical sensors. In the beginning, a generic biosensor and its several components are introduced, followed by the fundamentals and state-of-art technology behind developing a variety of interferometry-based fiber optic sensors. These include the Mach-Zehnder interferometer, the Michelson interferometer, the Fabry-Perot interferometer, the Sagnac interferometer, and biolayer interferometry (BLI). Further, several technical reports are comprehensively reviewed and compared in a tabulated form for better comparison along with their advantages and disadvantages. Further, the limitations and possible solutions for these sensors are discussed to transform these in-lab devices into commercial industry applications. At the end, in conclusion, comments on the prospects of field development toward the commercialization of sensor technology are also provided. The Review targets a broad range of audiences including beginners and also motivates the experts helping to solve the real issues for developing an industry-oriented sensing device.

5.
Opt Lett ; 48(20): 5391-5394, 2023 Oct 15.
Artículo en Inglés | MEDLINE | ID: mdl-37831875

RESUMEN

Pollution monitoring in waterways and oceans is often performed in a laboratory on samples previously taken from the environment. The integration of molecular imprinting polymer nanoparticles (MIP-NPs) with a novel, to the best of our knowledge, fiber optic interferometer allowed a fast and selective detection of water pollutant 2,4-Dichlorophenol (2,4-DCP). The proposed sensor with an increased surface-to-volume ratio of MIP-NPs provided an enhanced sensitivity of 17.1 nm/µM and a wide operating range of 0.1-100 µM. It showed a highly repeatable performance and potential to measure up to nM concentrations. This integrated technique is suitable for the development of compact, stable, precise, and sensitive biosensors for online monitoring and remote chemical sensing applications.

6.
Sensors (Basel) ; 23(17)2023 Aug 29.
Artículo en Inglés | MEDLINE | ID: mdl-37687950

RESUMEN

This numerical research presents a simple hybrid structure comprised of TiO2-Cu-BaTiO3 for a modified Kretschmann configuration that exhibits high sensitivity and high resolution for biosensing applications through an angular interrogation method. Recently, copper (Cu) emerged as an exceptional choice as a plasmonic metal for developing surface plasmon sensors (SPR) with high resolution as it yields finer, thinner SPR curves than Ag and Au. As copper is prone to oxidation, especially in ambient conditions, the proposed structure involves the utilization of barium titanate (BaTiO3) film as a protection layer that not only preserves Cu film from oxidizing but enhances the performance of the sensor to a great extent. Numerical results also show that the utilization of a thin adhesive layer of titanium dioxide (TiO2) between the prism base and Cu film not only induces strong interaction between them but also enhances the performance of the sensor. Such a configuration, upon suitable optimization of the thickness of each layer, is found to enhance sensitivity as high as 552°/RIU with a figure of merit (FOM) of 136.97 RIU-1. This suggested biosensor design with enhanced sensitivity is expected to enable long-term detection with greater accuracy and sensitivity even when using Cu as a plasmonic metal.


Asunto(s)
Cobre , Resonancia por Plasmón de Superficie , Películas Cinematográficas
7.
Opt Express ; 31(7): 11788-11803, 2023 Mar 27.
Artículo en Inglés | MEDLINE | ID: mdl-37155805

RESUMEN

Histamine is a biologically active molecule that serves as a reliable predictor of the quality of fish. In this work, authors have developed a novel humanoid-shaped tapered optical fiber (HTOF) biosensor based on the localized surface plasmon resonance (LSPR) phenomenon to detect varying histamine concentrations. In this experiment, a novel and distinctive tapering structure has been developed using a combiner manufacturing system and contemporary processing technologies. Graphene oxide (GO)/multi-walled carbon nanotubes (MWCNTs) are immobilized on the HTOF probe surface to increase the biocompatibility of biosensor. In this instance, GO/MWCNTs are deployed first, then gold nanoparticles (AuNPs). Consequently, the GO/MWCNTs help to give abundant space for the immobilization of nanoparticles (AuNPs in this case) as well as increase surface area for the attachment of biomolecules to the fiber surface. By immobilizing AuNPs on the surface of the probe, the evanescent field can stimulate the AuNPs and excite the LSPR phenomena for sensing the histamine. The surface of the sensing probe is functionalized with diamine oxidase enzyme in order to enhance the histamine sensor's particular selectivity. The proposed sensor is demonstrated experimentally to have a sensitivity of 5.5 nm/mM and a detection limit of 59.45 µM in the linear detection range of 0-1000 µM. In addition, the probe's reusability, reproducibility, stability, and selectivity are tested; the results of these indices show that the probe has a high application potential for detecting histamine levels in marine products.


Asunto(s)
Técnicas Biosensibles , Nanopartículas del Metal , Nanotubos de Carbono , Animales , Nanotubos de Carbono/química , Oro/química , Histamina , Fibras Ópticas , Reproducibilidad de los Resultados , Nanopartículas del Metal/química , Técnicas Biosensibles/métodos
8.
IEEE Trans Nanobioscience ; 22(2): 375-382, 2023 04.
Artículo en Inglés | MEDLINE | ID: mdl-35853044

RESUMEN

The article describes the development of a hetro-core optical fiber sensor structure based on localized surface plasmon resonance (LSPR) for the detection of cardiac troponin I (cTnI) solution. This was accomplished by fabricating a single-mode fiber - multimode fiber - single-mode fiber (SMS) structure. Then, fiber structure is immobilized with gold nanoparticles (AuNPs) and cerium oxide nanoparticles (CeO2-NPs) to improve its sensing capabilities. An UV-Vis spectrophotometer and a high-resolution transmission electron microscope (HR-TEM) are used to determine the morphology of synthesized nanoparticles. Scanning electron microscopy (SEM) is used to examine the state of immobilized NPs on the surface of sensing region. The developed sensor probe has a linear range of 0 to 1000 ng/mL cTnI, a sensitivity of 3 pm/(ng/mL), and a limit of detection (LoD) of 108.15 ng/mL. In real time, the proposed sensor will be used in a practice to detect acute myocardial infarction (AMI).


Asunto(s)
Técnicas Biosensibles , Cerio , Nanopartículas del Metal , Oro/química , Límite de Detección , Nanopartículas del Metal/química , Óxidos/química , Resonancia por Plasmón de Superficie , Troponina I
9.
J Phys Condens Matter ; 51(3)2022 Nov 15.
Artículo en Inglés | MEDLINE | ID: mdl-36223789

RESUMEN

In this paper, we propose the implementation of few layers of 2D materials in plexcitonic sensor for sensitivity enhancement. The positioning of the graphene layer implantation in such structure affects the sensitivity. The presence of graphene in contact with analyte offers ∼14% increase in the sensitivity of a bare plexcitonic sensor. Also, the performance of the sensor with the application of other 2D materials such as black phosphorus and MoS2has been studied. It is found that among graphene and black phosphorous, though MoS2offers highest sensitivity yet, low operating range limits its appropriateness. We believe that this study will provide a new insight in the applicability of 2D materials for sensing application.

10.
Sci Rep ; 12(1): 3798, 2022 Mar 08.
Artículo en Inglés | MEDLINE | ID: mdl-35260591

RESUMEN

Concatenated modal interferometers-based multipoint monitoring system for detection of amplitude, frequency, and phase of mechanical vibrations is proposed and demonstrated. The sensor probes are fabricated using identical photonic crystal fiber (PCF) sections and integrated along a single fiber channel to act as a compact and efficient sensing system. Each identical probe acts as a modal interferometer to generate a stable interference spectrum over the source spectrum. In the presence of an external dynamic field about each probe, the probes respond independently, producing a resultant signal superposition of each interferometer response signal. By analyzing the resultant signals using computational techniques, the vibration parameters applied to each interferometer are realized. The sensing system has an operation range of 1 Hz-1 kHz with a sensitivity of 51.5 pm/V. Such a sensing system would find wide applications at industrial, infrastructural, and medical fronts for monitoring various dynamic physical phenomena.

11.
Genes (Basel) ; 12(9)2021 08 24.
Artículo en Inglés | MEDLINE | ID: mdl-34573281

RESUMEN

Leber's hereditary optic neuropathy (LHON) is a mitochondrial disorder that causes loss of central vision. Three primary variants (m.3460G>A, m.11778G>A, and m.14484T>C) and about 16 secondary variants are responsible for LHON in the majority of the cases. We investigated the complete mitochondrial DNA (mtDNA) sequences of 189 LHON patients and found a total of 54 disease-linked pathogenic variants. The primary variants m.11778G>A and m.14484T>C were accountable for only 14.81% and 2.64% cases, respectively. Patients with these two variants also possessed additional disease-associated variants. Among 156 patients who lacked the three primary variants, 16.02% harboured other LHON-associated variants either alone or in combination with other disease-associated variants. Furthermore, we observed that none of the haplogroups were explicitly associated with LHON. We performed a meta-analysis of m.4216T>C and m.13708G>A and found a significant association of these two variants with the LHON phenotype. Based on this study, we recommend the use of complete mtDNA sequencing to diagnose LHON, as we found disease-associated variants throughout the mitochondrial genome.


Asunto(s)
ADN Mitocondrial/genética , Heterogeneidad Genética , Atrofia Óptica Hereditaria de Leber/genética , Adolescente , Adulto , Niño , Femenino , Frecuencia de los Genes , Humanos , Masculino , Atrofia Óptica Hereditaria de Leber/patología
12.
IEEE Trans Nanobioscience ; 20(3): 377-384, 2021 07.
Artículo en Inglés | MEDLINE | ID: mdl-34018936

RESUMEN

In this work, a localized plasmon-based sensor is developed for para-cresol (p-cresol) - a water pollutant detection. A nonadiabatic [Formula: see text] of tapered optical fiber (TOF) has been experimentally fabricated and computationally analyzed using beam propagation method. For optimization of sensor's performance, two probes are proposed, where probe 1 is immobilized with gold nanoparticles (AuNPs) and probe 2 is immobilized with the AuNPs along with zinc oxide nanoparticles (ZnO-NPs). The synthesized metal nanomaterials were characterized by ultraviolet-visible spectrophotometer (UV-vis spectrophotometer) and transmission electron microscope (HR-TEM). The nanomaterials coating on the surface of the sensing probe were characterized by a scanning electron microscope (SEM). Thereafter, to increase the specificity of the sensor, the probes are functionalized with tyrosinase enzyme. Different solutions of p-cresol in the concentration range of [Formula: see text] - [Formula: see text] are prepared in an artificial urine solution for sensing purposes. Different analytes such as uric acid, ß -cyclodextrin, L-alanine, and glycine are prepared for selectivity measurement. The linearity range, sensitivity, and limit of detection (LOD) of probe 1 are [Formula: see text] - [Formula: see text], 7.2 nm/mM (accuracy 0.977), and [Formula: see text], respectively; and for probe 2 are [Formula: see text] - [Formula: see text], 5.6 nm/mM (accuracy 0.981), and [Formula: see text], respectively. Thus, the overall performance of probe 2 is quite better due to the inclusion of ZnO-NPs that increase the biocompatibility of sensor probe. The proposed sensor structure has potential applications in the food industry and clinical medicine.


Asunto(s)
Nanopartículas del Metal , Contaminantes del Agua , Óxido de Zinc , Cresoles , Oro , Fibras Ópticas
13.
J Neurol ; 268(6): 2192-2207, 2021 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-33484326

RESUMEN

BACKGROUND: Mitochondrial disorders are clinically complex and have highly variable phenotypes among all inherited disorders. Mutations in mitochon drial DNA (mtDNA) and nuclear genome or both have been reported in mitochondrial diseases suggesting common pathophysiological pathways. Considering the clinical heterogeneity of mitochondrial encephalopathy, lactic acidosis and stroke-like episodes (MELAS) phenotype including focal neurological deficits, it is important to look beyond mitochondrial gene mutation. METHODS: The clinical, histopathological, biochemical analysis for OXPHOS enzyme activity, and electron microscopic, and neuroimaging analysis was performed to diagnose 11 patients with MELAS syndrome with a multisystem presentation. In addition, whole exome sequencing (WES) and whole mitochondrial genome sequencing were performed to identify nuclear and mitochondrial mutations. RESULTS: Analysis of whole mtDNA sequence identified classical pathogenic mutation m.3243A > G in seven out of 11 patients. Exome sequencing identified pathogenic mutation in several nuclear genes associated with mitochondrial encephalopathy, sensorineural hearing loss, diabetes, epilepsy, seizure and cardiomyopathy (POLG, DGUOK, SUCLG2, TRNT1, LOXHD1, KCNQ1, KCNQ2, NEUROD1, MYH7) that may contribute to classical mitochondrial disease phenotype alone or in combination with m.3243A > G mutation. CONCLUSION: Individuals with MELAS exhibit clinical phenotypes with varying degree of severity affecting multiple systems including auditory, visual, cardiovascular, endocrine, and nervous system. This is the first report to show that nuclear genetic factors influence the clinical outcomes/manifestations of MELAS subjects alone or in combination with m.3243A > G mutation.


Asunto(s)
Acidosis Láctica , Síndrome MELAS , Accidente Cerebrovascular , ADN Mitocondrial/genética , Genes Mitocondriales , Humanos , Síndrome MELAS/complicaciones , Síndrome MELAS/genética , Encefalomiopatías Mitocondriales , Mutación , Accidente Cerebrovascular/genética
14.
Biosens Bioelectron ; 168: 112557, 2020 Nov 15.
Artículo en Inglés | MEDLINE | ID: mdl-32877781

RESUMEN

A compact, portable, label-free, and ultra-sensitive sensor is proposed to detect cancerous cells based on Multi-Core Fiber (MCF) comprising of seven cores arranged in a hexagonal shape spliced with Single-Mode Fiber (SMF). Here, cytosensing based on fiber optic Localized Surface Plasmon Resonance (LSPR) is used for the efficient detection of different types of cancer cells. The proposed sensor structure is etched in a controlled manner to increase the evanescent wave (EWs) and coupling of modes between the cores of MCF. The etched MCF based LSPR probe has high refractive index sensitivity (RIS). To further increase the sensitivity, the sensor structure is immobilized with different nanomaterials (NMs) such as optimized size of gold nanoparticles (AuNPs), graphene oxide (GO), and copper oxide nanoflowers (CuO-NFs). AuNPs increase the sensitivity using LSPR, whereas, GO and CuO-NFs helps to increase the biocompatibility of sensor. The developed probe is further coated with 2-deoxy-D-glucose (2-DG) over NMs that are specific for the detection of cancer cells. In this work, various cancerous cell lines i.e. HepG2, Hepa 1-6, MCF-7, A549, and normal cell lines i.e. NCF and LO2 are detected using the developed sensing probe. Various analysis of proposed sensor such as selectivity, reusability, anti-interference ability, and involvement of GLUT receptor in detection has also been performed. The proposed etched sensor is ultra-sensitive for detection of HepG2, Hepa1 6, A549, MCF-7, LO2, and NCF cell lines with a limit of detection (LoD) of 3, 2, 2, 2, 4, 10 cells/mL, respectively in the linear range of 1 × 102-1 × 106 cells/mL.


Asunto(s)
Técnicas Biosensibles , Nanopartículas del Metal , Neoplasias , Cobre , Oro , Grafito , Neoplasias/diagnóstico , Óxidos , Resonancia por Plasmón de Superficie
15.
Biosens Bioelectron ; 141: 111347, 2019 Sep 15.
Artículo en Inglés | MEDLINE | ID: mdl-31226605

RESUMEN

The molecular imprinting techniques with interferometric platform are promising for next-generation optical sensors for online and remote biosensing and device applications. This technique has shown a tremendous potential to provide a highly specific detection of target analyte/molecule with artificial complementary scaffolds in the polymeric nanostructures relay with tunable aspect ratio, low cost synthesis procedure and applicability in harsh environment. To date, no molecular imprinted nanoparticles has been integrated with optical microwire platform in the literature. Here, we report the synthesis of a molecularly imprinted nanocarrier using hydrothermal process that act as receptors and combines optical microwire as transducing support. The detailed sensing process for one of the widely used pesticides (parathion methyl) in the detection range of 10-12 to 10-4 M with hyper-sensitivity and detection limit of 1.30 × 1012 nm/M and 79.43 fM respectively have been achieved. The compact sensing probe tested with real water samples collected from various sources show percentage recovery of around 100%. We strongly believe that the process for probe development will open a new gateway for next generation selective biosensing for biomedical research applications.


Asunto(s)
Técnicas Biosensibles/instrumentación , Interferometría/instrumentación , Metil Paratión/análisis , Plaguicidas/análisis , Contaminantes Químicos del Agua/análisis , Diseño de Equipo , Límite de Detección , Impresión Molecular , Nanopartículas/química , Agua/análisis
16.
Sci Rep ; 9(1): 8313, 2019 Jun 05.
Artículo en Inglés | MEDLINE | ID: mdl-31165744

RESUMEN

In the present work we propose a PCF (photonic crystal fiber) based Modal interferometer detector for sensing low flow velocity by detecting the frequency of vortices shed from a bluff body. The proposed novel design encapsulates the interferometric arm inside a metal casing to protect the sensor from harsh process fluids. The characterization of the developed probe is conducted under no flow conditions using a piezo actuator to evaluate the sensor response over wide frequency range (0-500 Hz). The developed sensors shows a reasonably flat response in the tested frequency range. Experiments are conducted by employing the developed sensor behind a bluff body of a vortex flowmeter to measure the frequency of the shed vortices and hence, the fluid flow rate. The low flow rate sensitivity of the vortex flowmeter is improved many folds by using the present sensor and the minimum Reynolds number detected is Re = 5000. A linear trend is observed between the frequency of the vortices and the flow velocity which is desirable for fluid flow measurement. The PCF based interferometric sensor with metal encapsulation makes the vortex flowmeter, sensitive at low flow rates, robust and economical to be used in industrial application.

17.
J Infect Public Health ; 12(3): 380-387, 2019.
Artículo en Inglés | MEDLINE | ID: mdl-30611734

RESUMEN

BACKGROUND: The host genetic factors play important role in determining the outcome of visceral leishmaniasis (VL). Macrophage migration inhibitory factor (MIF) is an important host cytokine, which is a key regulator of innate immune system. Genetic variants in MIF gene have been found to be associated with several inflammatory and infectious diseases. Role of MIF is well documented in leishmaniasis diseases, including Indian visceral leishmaniasis, where elevated level of serum MIF has been associated with VL phenotypes. However, there was no genetic study to correlate MIF variants in VL, therefore, we aimed to study the possible association of three reported MIF gene variants -794 CATT, -173G > C and non-coding RNA gene LOC284889 in Indian VL phenotype. METHODS: Study subjects comprised of 214 VL patients along with ethnically and demographically matched 220 controls from VL endemic regions of Bihar state in India. RESULTS: We found no significant difference between cases and controls in allelic, genotypic and haplotype frequency of the markers analysed [-794 CATT repeats (χ2=0.86; p=0.35; OR=0.85; 95% CI=0.61-1.19); -173 G>C polymorphism (χ2=1.11; p=0.29; OR=0.83; 95% CI=0.59-1.16); and LOC284889 (χ2=0.78; p=0.37; OR=0.86; 95% CI=0.61-1.20)]. CONCLUSION: Since we did not find any significant differences between case and control groups, we conclude that sequencing of complete MIF gene and extensive study on innate and adaptive immunity genes may help in identifying genetic variations that are associated with VL susceptibility/resistance among Indians.


Asunto(s)
Predisposición Genética a la Enfermedad , Leishmaniasis Visceral/epidemiología , Factores Inhibidores de la Migración de Macrófagos/genética , Adolescente , Adulto , Estudios de Casos y Controles , Femenino , Estudios de Asociación Genética , Genotipo , Humanos , India/epidemiología , Leishmaniasis Visceral/genética , Masculino , Persona de Mediana Edad , Adulto Joven
18.
Sci Rep ; 8(1): 12701, 2018 Aug 23.
Artículo en Inglés | MEDLINE | ID: mdl-30140024

RESUMEN

We propose a very compact diaphragm free optical microphone consisting a tapered micro-tip in cantilever configuration for detection of low frequency acoustic signals. The change in the light coupling between the micro-tip and the source fiber caused by the acoustic pressure is utilized to detect the external acoustic signal. The sensitivity and working range of the sensor depend on three key factors, the length of the micro-tip cantilever, the distance between the micro-tip and SMF, and the offset between the micro-tip central axis and SMF central axis. Hence, by changing any of these parameters, the performance of the sensor can be easily tuned. Experimental results show that for a cantilever length of 15 mm, the probe has a maximum acoustic sensitivity of 10.63 mV/Pa or -159.5 dB re 1 V/µPa, noise-limited minimum detectable pressure of 19.1 mPa/√Hz and the linear frequency range is 0-400 Hz. The SMF only structure along with photodetector-based interrogation makes this acoustic sensor economical.

19.
Appl Opt ; 56(12): 3510-3517, 2017 Apr 20.
Artículo en Inglés | MEDLINE | ID: mdl-28430221

RESUMEN

A graphene-based surface plasmon resonance sensor using D-shaped fiber in anti-crossing has been designed. Silver as a plasmon active metal is followed by graphene, which helps in preventing oxidation and shows better adsorption efficiency to biomolecules. A wavelength interrogation technique based on the finite element method has been used to evaluate performance parameters. Design parameters such as thickness of silver, residual cladding, and GeO2 dopant concentration have been optimized. The wavelength sensitivity is found to be 6800 nm/RIU and resolution of 8.05×10-5 RIU. We believe that usage of graphene on silver may open a new window for study of online biomolecular interaction.

20.
Opt Lett ; 40(4): 467-70, 2015 Feb 15.
Artículo en Inglés | MEDLINE | ID: mdl-25680126

RESUMEN

A stable nano-displacement sensor based on large mode area photonic crystal fiber (PCF) modal interferometer is presented. The compact setup requires simple splicing of a small piece of PCF with a single mode fiber (SMF). The excitation and recombination of modes is carried out in a single splice. The use of a reflecting target creates an extra cavity that discretizes the interference pattern of the mode interferometer, boosting the displacement resolution to nanometer level. The proposed modal interferometric based displacement sensor is highly stable and shows sensitivity of 32 pm/nm.

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